feat: automatic K selection (CellCharter's ClusterAutoK) - #1276

Draft

selmanozleyen wants to merge 10 commits into

feat/experimental-params-typeddictsfrom

feat/cluster-auto-k-seed

Commits on Sep 3, 2026

Add auto-K cluster selection and nhood_entropy
selmanozleyen
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4cdcd0c
Use copy instead of inplace in auto-K API
selmanozleyen
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24e4fb6
Trim narrative, fix seeding and docs refs
selmanozleyen
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1a25ee4
Collapse ClusterAutoKUns into ClusterAutoKResult
selmanozleyen
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024f7ee
Document result fields with attribute comments
selmanozleyen
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af05f87
Fix sphinx refs on auto-K result type
selmanozleyen
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96ed68d
Document auto-K result with a typed dict template
selmanozleyen
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58e0898
Align auto-K tests with rng API
selmanozleyen
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afc5110
Merge feat/experimental-params-typeddicts into auto-K branch
selmanozleyen
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0d5ea56
Reuse shared TypedDict autosummary template
selmanozleyen
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9a66160