Add a build phase that validates generated PaNET with LintedData#463
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Motivation: Use available tools to check for common problems with PaNET. Modification: Add build step that runs the LintedData image on the generated output. The commit also includes an initial configuration that suppresses some known issues with PaNET. Issue pan-ontologies#462 will resolve these suppressed checks, allowing more correct output from PaNET: pan-ontologies#462 Result: Better Q/A process for PaNET output. Closes: pan-ontologies#409
kara-mela
approved these changes
Jun 18, 2026
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Motivation:
Use available tools to check for common problems with PaNET.
Modification:
Add build step that runs the LintedData image on the generated output. The commit also includes an initial configuration that suppresses some known issues with PaNET. Issue #462 will resolve these suppressed checks, allowing more correct output from PaNET:
#462
Result:
Better Q/A process for PaNET output.
Closes: #409
Motivation
Modification
Result
Related Issues