Repositories list

• biojava

  Public
  📖🔬☕ BioJava is an open-source project dedicated to providing a Java library for processing biological data.

  javabioinformaticsgenomics+ 9pdbparser-libraryprotein-data-bankprotein-structureprotein-sequencessequence-alignmentprotein-modification+ 2

  Java

  •

  GNU Lesser General Public License v2.1

  •397•620•67•2•Updated Dec 19, 2025Dec 19, 2025

• biojava-spark

  Public
  💥 Algorithms that are built around BioJava and run on Apache Spark

  Java

  •

  GNU Lesser General Public License v2.1

  •3•8•0•1•Updated Dec 19, 2025Dec 19, 2025

• biojava-http

  Public

  biojava/biojava-http’s past year of commit activity
  HTML/JS based user interfaces for BioJava

  Java

  •6•4•0•2•Updated Dec 19, 2025Dec 19, 2025

• biojava-legacy

  Public
  Legacy BioJava 1 Code

  Java

  •16•5•4•1•Updated Nov 7, 2025Nov 7, 2025

• biojava.github.io

  Public
  The code for the new BioJava homepage.

  SCSS

  •

  Other

  •16•4•6•7•Updated Jan 9, 2025Jan 9, 2025

• biojava-tutorial

  Public

  biojava/biojava-tutorial’s past year of commit activity
  📖📚An introductory tutorial for BioJava

  javabioinformaticstutorial+ 5genomicsprotein-structurebiojava3d-structureprotein-disorder

  Python

  •

  Other

  •42•123•4•0•Updated Feb 23, 2024Feb 23, 2024

• rcsb-sequenceviewer

  Public archive
  PDB Amino Acid Sequence Viewer

  Java

  •4•6•2•1•Updated Feb 8, 2024Feb 8, 2024

• rcsb-viewers

  Public archive
  Biojava based RCSB Viewers

  Java

  •10•3•2•4•Updated Feb 8, 2024Feb 8, 2024

• biojava-adam

  Public
  Biojava and ADAM integration.

  Java

  •

  GNU Lesser General Public License v3.0

  •2•2•3•1•Updated Apr 21, 2023Apr 21, 2023

• logo

  Public

  biojava/logo’s past year of commit activity
  A repository to host the competition for a new BioJava logo

  Other

  •5•5•0•0•Updated Mar 12, 2018Mar 12, 2018

• biojava-cookbook

  Public
  Collection of quick 'recipes' for common BioJava tasks

  0•1•2•0•Updated Jan 11, 2017Jan 11, 2017

• maven-repo

  Public
  A BioJava specific maven repository, mostly for legacy releases, since all new releases are on Maven Central

  GNU Lesser General Public License v2.1

  •0•1•0•0•Updated Apr 21, 2016Apr 21, 2016