Dear Author, thank you for providing such a useful tool. As the species I study possesses non-linear, circular chromosomes, I reviewed the principles of cooltools.expected_cis and found it unsuitable for plotting the relationship between genomic distance and contact frequency in circular chromosome genomes. I wonder if you have encountered this scenario before? Might you offer some advice?
Dear Author, thank you for providing such a useful tool. As the species I study possesses non-linear, circular chromosomes, I reviewed the principles of cooltools.expected_cis and found it unsuitable for plotting the relationship between genomic distance and contact frequency in circular chromosome genomes. I wonder if you have encountered this scenario before? Might you offer some advice?