Liverpool AI link outs from PubMed IDs in User Comments and PubMed tables#95
Draft
bobular wants to merge 14 commits intoapi-legacy-68-ffrom
Draft
Liverpool AI link outs from PubMed IDs in User Comments and PubMed tables#95bobular wants to merge 14 commits intoapi-legacy-68-ffrom
bobular wants to merge 14 commits intoapi-legacy-68-ffrom
Conversation
- Unifies PubMed references from curated sources and user comments - Outputs pubmed_id, pubmed_source, source_id, and project_id - Labels sources as 'Curated', 'User comments', or 'Curated & User comments' - Uses Oracle LISTAGG to handle duplicate PMIDs across sources - Includes comprehensive test parameters for all major projects 🤖 Generated with [Claude Code](https://claude.ai/code) Co-Authored-By: Claude <noreply@anthropic.com>
- Creates new gene record table with AI summary link-outs - Links to Liverpool collaborators' AI summary service - Includes PubMed ID links and source attribution - Uses internal="false" for external Liverpool links - Adds ontology entry in Literature and Reference category 🤖 Generated with [Claude Code](https://claude.ai/code) Co-Authored-By: Claude <noreply@anthropic.com>
bobular
commented
Sep 10, 2025
| <column name="comment_id"/> | ||
| <column name="pmids"/> | ||
| <column name="pmids_link"/> | ||
| <column name="liverpool_ai_links"/> |
Member
Author
There was a problem hiding this comment.
pmids_link was never used or rendered so I replaced it
This file contains hidden or bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
Sign up for free
to join this conversation on GitHub.
Already have an account?
Sign in to comment
Add this suggestion to a batch that can be applied as a single commit.This suggestion is invalid because no changes were made to the code.Suggestions cannot be applied while the pull request is closed.Suggestions cannot be applied while viewing a subset of changes.Only one suggestion per line can be applied in a batch.Add this suggestion to a batch that can be applied as a single commit.Applying suggestions on deleted lines is not supported.You must change the existing code in this line in order to create a valid suggestion.Outdated suggestions cannot be applied.This suggestion has been applied or marked resolved.Suggestions cannot be applied from pending reviews.Suggestions cannot be applied on multi-line comments.Suggestions cannot be applied while the pull request is queued to merge.Suggestion cannot be applied right now. Please check back later.
Not planning to release just yet. See Slack
#team_ai_deployment12 September