CK: removed the api reference

[spolifroni-amd]

Proposed changes

The CK team has asked that the CK/CK Tile API reference be removed because it's of limited use. The CK/CK Tile is a template-only library that also contains example- and application-specific content that isn't of use to a user.

Removing the reference involved removing the links to the API reference, and also changing conf.py and requirements.in so doxygen no longer runs. This should also make doc builds substantially faster.

I also took the opportunity to fix some issues with the CK Tile doc and the glossary, and change the way the CK Tile doc was linked.

[Copilot]

Pull request overview

This pull request removes the CK/CK Tile API reference from the documentation, as it's of limited use to users due to the library's template-only nature. The changes involve removing API reference links, disabling Doxygen in the build configuration, and fixing various documentation issues.

Changes:

• Removed API reference links and documentation sections from multiple files
• Disabled Doxygen processing in conf.py by removing run_doxygen() and enable_api_reference() calls
• Updated package dependencies in requirements.txt, removing Doxygen-related packages (doxysphinx, matplotlib, etc.)
• Fixed documentation issues including typos, incorrect cross-references, and formatting problems

Reviewed changes

Copilot reviewed 16 out of 18 changed files in this pull request and generated 1 comment.

Show a summary per file

File	Description
docs/sphinx/requirements.txt	Removed Doxygen-related dependencies and updated package versions
docs/sphinx/_toc.yml.in	Removed API reference entries and simplified entry titles
docs/reference/Composable-Kernel-wrapper.rst	Removed Doxygen-generated API documentation sections
docs/reference/Composable-Kernel-Glossary.rst	Fixed typos and incorrect term references
docs/index.rst	Removed API reference links from main documentation page
docs/conf.py	Disabled Doxygen processing
docs/conceptual/ck_tile/tile_window.rst	Added blank lines for formatting
docs/conceptual/ck_tile/tile_distribution.rst	Fixed reference label from ck_tile_distribution to ck_tile_tile_distribution
docs/conceptual/ck_tile/lds_index_swapping.rst	Fixed typo, converted code blocks to math blocks
docs/conceptual/ck_tile/introduction_motivation.rst	Fixed cross-reference to use correct label
docs/conceptual/ck_tile/coordinate_movement.rst	Fixed cross-reference from ck_tile_tile_distribution to ck_tile_distribution
docs/conceptual/ck_tile/convolution_example.rst	Removed duplicate image, fixed cross-references
docs/conceptual/ck_tile/buffer_views.rst	Added overview section
docs/conceptual/ck_tile/adaptors.rst	Fixed heading placement
docs/conceptual/ck_tile/MERMAID_DIAGRAMS.md	Removed file documenting diagram management
docs/conceptual/ck_tile/CK-tile-index.rst	Updated title and structure

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[Copilot]

The reference label has been changed from ck_tile_distribution to ck_tile_tile_distribution, introducing a redundant 'tile' prefix. This creates inconsistency with other references in the codebase that use ck_tile_distribution.

Suggested change

	.. _ck_tile_tile_distribution:
	.. _ck_tile_distribution:

[afagaj]

This is ok because ck_tile is the scope and tile_distribution is the concept within that scope.