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I've made these improvements, hoping they will be useful:
_join_comparative_analysesfunction to_build_metadata_tableto incorporate comparative datasets;_join_comparative_analysesqueries the comparative dataset using SQL and then prepares for matching;_parse_composite_identifier: parses the ID from the comparative dataset for matching._join_comparative_analysesto try both uppercase and lowercase beginnings for the repo ID.query_dtofunction to specifically handle the intersection of specified binding and perturbation datasets.BrentLab/rossi_2021/rossi_2021_af_combined
Some use semicolons, others use slashes.
Some use uppercase, others use lowercase:
BrentLab/Hackett_2020;hackett_2020;34 BrentLab/harbison_2004;harbison_2004;3
Do we need to unify them? Or should we handle them separately with functions?
5. I failed to read the calling cards data; the program crashed several times, but I haven't found the reason yet, so I haven't continued with the analysis.