@@ -530,7 +530,7 @@ <h2>Working with the saved region<a class="headerlink" href="#working-with-the-s
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533- < img alt ="../../_images/a63c16dec8933d4e969ad920dc6d6f2dcbe29476f2e11a7ec646e0829e84726c .png " src ="../../_images/a63c16dec8933d4e969ad920dc6d6f2dcbe29476f2e11a7ec646e0829e84726c .png " />
533+ < img alt ="../../_images/cdd5dab73c3eba49c9843be3f54c5d77eb13b87d9d45940e870aaeff4878e7dc .png " src ="../../_images/cdd5dab73c3eba49c9843be3f54c5d77eb13b87d9d45940e870aaeff4878e7dc .png " />
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536536</ section >
@@ -551,7 +551,7 @@ <h2>Cropping the dataset to the region<a class="headerlink" href="#cropping-the-
551551< div class ="cell_output docutils container ">
552552< div class ="output text_plain highlight-myst-ansi notranslate "> < div class ="highlight "> < pre > < span > </ span > SpatialData object
553553├── Images
554- │ └── 'hne': DataTree[cyx] (3, 2407, 3858 ), (3, 1204, 1929 ), (3, 601, 964 ), (3, 301, 483 )
554+ │ └── 'hne': DataTree[cyx] (3, 2352, 4035 ), (3, 1176, 2017 ), (3, 588, 1008 ), (3, 294, 505 )
555555├── Shapes
556556│ ├── 'poly': GeoDataFrame shape: (1, 1) (2D shapes)
557557│ └── 'spots': GeoDataFrame shape: (351, 2) (2D shapes)
@@ -576,7 +576,7 @@ <h2>Cropping the dataset to the region<a class="headerlink" href="#cropping-the-
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579- < img alt ="../../_images/48c1e943f14828f26a2bb1c004b15e17cc68134706fb33d55aea03ee365e6f82 .png " src ="../../_images/48c1e943f14828f26a2bb1c004b15e17cc68134706fb33d55aea03ee365e6f82 .png " />
579+ < img alt ="../../_images/b66c634a5a512f5b08f67c786dd0e82ff3bcbdf4c3570ac83bf67c7c3e5d992e .png " src ="../../_images/b66c634a5a512f5b08f67c786dd0e82ff3bcbdf4c3570ac83bf67c7c3e5d992e .png " />
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@@ -596,7 +596,9 @@ <h2>For reproducibility<a class="headerlink" href="#for-reproducibility" title="
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599- < div class ="output stream highlight-myst-ansi notranslate "> < div class ="highlight "> < pre > < span > </ span > Python implementation: CPython
599+ < div class ="output stream highlight-myst-ansi notranslate "> < div class ="highlight "> < pre > < span > </ span > The watermark extension is already loaded. To reload it, use:
600+ %reload_ext watermark
601+ Python implementation: CPython
600602Python version : 3.14.4
601603IPython version : 9.13.0
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