From 7b4d0f1c18872325cb72ebf86f3251bf90a6ca40 Mon Sep 17 00:00:00 2001 From: =?UTF-8?q?Joaqu=C3=ADn=20T=C3=A1rraga=20Gim=C3=A9nez?= Date: Mon, 16 Feb 2026 12:16:32 +0100 Subject: [PATCH] app: fix export for ontology data, #TASK-8156 --- .../app/cli/admin/executors/ExportCommandExecutor.java | 4 +++- 1 file changed, 3 insertions(+), 1 deletion(-) diff --git a/cellbase-app/src/main/java/org/opencb/cellbase/app/cli/admin/executors/ExportCommandExecutor.java b/cellbase-app/src/main/java/org/opencb/cellbase/app/cli/admin/executors/ExportCommandExecutor.java index 18cb05ce7..18a41ddf1 100644 --- a/cellbase-app/src/main/java/org/opencb/cellbase/app/cli/admin/executors/ExportCommandExecutor.java +++ b/cellbase-app/src/main/java/org/opencb/cellbase/app/cli/admin/executors/ExportCommandExecutor.java @@ -417,7 +417,9 @@ private int exportOntologyData() throws CellBaseException, IOException { int counter = 0; CellBaseFileSerializer serializer = new CellBaseJsonFileSerializer(output, ONTOLOGY_DATA); OntologyManager ontologyManager = managerFactory.getOntologyManager(species, assembly); - CellBaseIterator iterator = ontologyManager.iterator(new OntologyQuery()); + OntologyQuery ontologyQuery = new OntologyQuery(); + ontologyQuery.setDataRelease(dataRelease); + CellBaseIterator iterator = ontologyManager.iterator(ontologyQuery); while (iterator.hasNext()) { serializer.serialize(iterator.next()); counter++;