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modules.json
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191 lines (191 loc) · 8.75 KB
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{
"name": "nf-core/multiplesequencealign",
"homePage": "https://github.com/nf-core/multiplesequencealign",
"repos": {
"https://github.com/nf-core/modules.git": {
"modules": {
"nf-core": {
"clustalo/align": {
"branch": "master",
"git_sha": "81880787133db07d9b4c1febd152c090eb8325dc",
"installed_by": ["modules"]
},
"clustalo/guidetree": {
"branch": "master",
"git_sha": "81880787133db07d9b4c1febd152c090eb8325dc",
"installed_by": ["modules"]
},
"csvtk/concat": {
"branch": "master",
"git_sha": "fa92936611247ca647ddee970f94d83f1bcb0ffe",
"installed_by": ["modules"]
},
"csvtk/join": {
"branch": "master",
"git_sha": "fa92936611247ca647ddee970f94d83f1bcb0ffe",
"installed_by": ["modules"],
"patch": "modules/nf-core/csvtk/join/csvtk-join.diff"
},
"famsa/align": {
"branch": "master",
"git_sha": "81880787133db07d9b4c1febd152c090eb8325dc",
"installed_by": ["modules"]
},
"famsa/guidetree": {
"branch": "master",
"git_sha": "81880787133db07d9b4c1febd152c090eb8325dc",
"installed_by": ["modules"]
},
"fastavalidator": {
"branch": "master",
"git_sha": "81880787133db07d9b4c1febd152c090eb8325dc",
"installed_by": ["modules"]
},
"fastqc": {
"branch": "master",
"git_sha": "81880787133db07d9b4c1febd152c090eb8325dc",
"installed_by": ["modules"]
},
"foldmason/createdb": {
"branch": "master",
"git_sha": "81880787133db07d9b4c1febd152c090eb8325dc",
"installed_by": ["modules"]
},
"foldmason/easymsa": {
"branch": "master",
"git_sha": "81880787133db07d9b4c1febd152c090eb8325dc",
"installed_by": ["modules"],
"patch": "modules/nf-core/foldmason/easymsa/foldmason-easymsa.diff"
},
"foldmason/msa2lddtreport": {
"branch": "master",
"git_sha": "81880787133db07d9b4c1febd152c090eb8325dc",
"installed_by": ["modules"]
},
"kalign/align": {
"branch": "master",
"git_sha": "81880787133db07d9b4c1febd152c090eb8325dc",
"installed_by": ["modules"],
"patch": "modules/nf-core/kalign/align/kalign-align.diff"
},
"learnmsa/align": {
"branch": "master",
"git_sha": "81880787133db07d9b4c1febd152c090eb8325dc",
"installed_by": ["modules"]
},
"mafft/align": {
"branch": "master",
"git_sha": "fa92936611247ca647ddee970f94d83f1bcb0ffe",
"installed_by": ["modules"]
},
"mafft/guidetree": {
"branch": "master",
"git_sha": "fa92936611247ca647ddee970f94d83f1bcb0ffe",
"installed_by": ["modules"]
},
"magus/align": {
"branch": "master",
"git_sha": "81880787133db07d9b4c1febd152c090eb8325dc",
"installed_by": ["modules"]
},
"mtmalign/align": {
"branch": "master",
"git_sha": "81880787133db07d9b4c1febd152c090eb8325dc",
"installed_by": ["modules"]
},
"multiqc": {
"branch": "master",
"git_sha": "81880787133db07d9b4c1febd152c090eb8325dc",
"installed_by": ["modules"]
},
"muscle5/super5": {
"branch": "master",
"git_sha": "81880787133db07d9b4c1febd152c090eb8325dc",
"installed_by": ["modules"]
},
"pigz/compress": {
"branch": "master",
"git_sha": "81880787133db07d9b4c1febd152c090eb8325dc",
"installed_by": ["modules"]
},
"pigz/uncompress": {
"branch": "master",
"git_sha": "db63f85c5ad0cea2a5e21b79a3851d0dabe9d351",
"installed_by": ["modules"]
},
"tcoffee/align": {
"branch": "master",
"git_sha": "a380f1dade8d24fea92176d0ffaa5ab6235b8e15",
"installed_by": ["modules"]
},
"tcoffee/alncompare": {
"branch": "master",
"git_sha": "37c4b509f55c63017f26f598cafd493d33ef8118",
"installed_by": ["modules"],
"patch": "modules/nf-core/tcoffee/alncompare/tcoffee-alncompare.diff"
},
"tcoffee/consensus": {
"branch": "master",
"git_sha": "81880787133db07d9b4c1febd152c090eb8325dc",
"installed_by": ["modules"]
},
"tcoffee/extractfrompdb": {
"branch": "master",
"git_sha": "81880787133db07d9b4c1febd152c090eb8325dc",
"installed_by": ["modules"],
"patch": "modules/nf-core/tcoffee/extractfrompdb/tcoffee-extractfrompdb.diff"
},
"tcoffee/irmsd": {
"branch": "master",
"git_sha": "81880787133db07d9b4c1febd152c090eb8325dc",
"installed_by": ["modules"]
},
"tcoffee/regressive": {
"branch": "master",
"git_sha": "6c2b47b2e26cf091cfce73658709823675833978",
"installed_by": ["modules"]
},
"tcoffee/seqreformat": {
"branch": "master",
"git_sha": "81880787133db07d9b4c1febd152c090eb8325dc",
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},
"tcoffee/tcs": {
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},
"untar": {
"branch": "master",
"git_sha": "81880787133db07d9b4c1febd152c090eb8325dc",
"installed_by": ["modules"]
},
"upp/align": {
"branch": "master",
"git_sha": "d7e273eec27a372c716565c07ea05cee8b06bd3a",
"installed_by": ["modules"]
}
}
},
"subworkflows": {
"nf-core": {
"utils_nextflow_pipeline": {
"branch": "master",
"git_sha": "c2b22d85f30a706a3073387f30380704fcae013b",
"installed_by": ["subworkflows"]
},
"utils_nfcore_pipeline": {
"branch": "master",
"git_sha": "51ae5406a030d4da1e49e4dab49756844fdd6c7a",
"installed_by": ["subworkflows"]
},
"utils_nfschema_plugin": {
"branch": "master",
"git_sha": "2fd2cd6d0e7b273747f32e465fdc6bcc3ae0814e",
"installed_by": ["subworkflows"]
}
}
}
}
}
}