cli.md

command line interface (CLI) examples

• Download 100 Sample Synthetic Patient Records, FHIR R4: 36 MB

• Unzip the file to a directory of your choice, e.g., ~/synthea-sample-data-fhir

unzip synthea_sample_data_fhir_latest.zip -d ~/synthea-sample-data-fhir

• convert the fhir resources to xlsx extract the Condition and Patient resources:

fhiry -i ~/synthea-sample-data-fhir -o ~/synthea-sample-data-fhir/output.xlsx --resource-types=Condition,Patient

All rows have a patientId column which is the FHIR resource id of the Patient resource.

• You can load a config file to specify the resource types and other options:

fhiry -i ~/synthea-sample-data-fhir -o ~/synthea-sample-data-fhir/output.xlsx --config-file ~/synthea-sample-data-fhir/config.json --resource-types=Condition,Patient

Config file example (config.json):

{
    "REMOVE": ["text.div", "meta"],
    "RENAME": {}
}